UCSD

CSCI

Center for Scientific Computation in Imaging

csci.ucsd.edu

CSCI Publications

Journal Articles

2023

  1. Arostegui MC, Shero M, Frank L, Berquist R, Braun CD. An enigmatic pelagic fish with internalized red muscle: a future regional endotherm or forever an ectotherm. Journal of Fish Biology, 2023.
  2. Galinsky VL, Frank LR. Critical brain wave dynamics of neuronal avalanches. Frontiers in Physics, 22 February 2023, Sec. Interdisciplinary Physics, Volume 11 - 2023 | https://doi.org/10.3389/fphy.2023.1138643
  3. Galinsky VL, Frank LR. Neuronal avalanches: Sandpiles of self organized criticality or critical dynamics of brain waves? Frontiers of Physics, 2023.
  4. Galinsky VL, Frank LR. Critically synchronized brain waves form an effective, robust and flexible basis for human memory and learning. Scientific Reports, 2023.

2022

  1. Englund EK, Berry DB, Behun JJ, Ward SR, Frank LR, Shahidi B. IVIM imaging of paraspinal muscles following moderate and high-intensity exercise in healthy individuals. Front Rehab Sci, 3, 910068, 2022. doi: 10.3389/fresc.2022.910068
  2. Solders SK, Galinsky VL, Clark AL, Sorg SF, Weigand AJ, Bondi MW, Frank LR. Diffusion MRI tractography of the locus coeruleus-transentorhinal cortex connections using GO-ESP. Magn Reson Med, 87(4), 1816-1831, 2022. doi: 10.1002/mrm.29088

2021

  1. Berry D, Englund EK, Chen S, Frank LF, Ward SR. Medical imaging of tissue engineering and regenerative medicine constructs. Biomater Sci, 9(2), 301-314, 2021. doi: 10.1039/d0bm00705f
  2. Berry D, Englund E, Galinsky V, Frank L, Ward S. Varying diffusion time to discriminate between simulated skeletal muscle injury models using stimulated echo diffusion tension imaging. Magn Reson Med, 85(5), 2524-2536, 2021. doi: 10.1002/mrm.28598
  3. Frank LR, Rowe TB, Boyer DM, Witmer LM, Galinsky VL. Unveiling the third dimension in morphometry with automated quantitative volumetric computations. Sci Rep, 11(1), 14438. 2021. doi: 10.1038/s41598-021-93490-4
  4. Galinsky VL, Frank LR. Collective synchronous spiking in a brain network of coupled nonlinear oscillators. Phys Rev Lett, 126(15), 158102, 2021. doi: 10.1103/PhysRevLett.126.158102

2020

  1. Berry DB, Rodriguez-Soto AE, Englund EK, Shahidi B, Parra C, Frank LR, Kelly KR, Ward SR. Multiparametric MRI characterization of level dependent differences in lumbar muscle size, quality, and microstructure. JOR Spine, 3(2), e1079, 2020. doi: 10.1002/jsp2.1079
  2. Carruth ED, Teh I, Schneider JE, McCulloch AD, Omens JH, Frank LR. Regional variations in ex-vivo diffusion tensor anisotropy are associated with cardiomyocyte remodeling in rats after left ventricular pressure overload. J Cardiovasc Magn Reson, 22(1), 21, 2020. doi: 10.1186/s12968-020-00615-1
  3. Frank LR, Zahneisen B, Galinsky VL. JEDI: Joint Estimation Diffusion Imaging of macroscopic and microscopic tissue properties. Magn Reson Med, 84: 966-990, 2020.
  4. Galinsky VL. Frank LR. Universal theory of brain waves: From linear loops to nonlinear synchronized spiking and collective brain rhythms. Phy Rev Res, 2(2), 023061, 2020. doi: 10.1103/PhysRevResearch.2.023061
  5. Galinsky VL, Frank LR. Brain Waves: Emergence of localized, persistent, weakly evanescent cortical loops. J Cognitive Neurosci, 32(11), 2178-2202, 2020. doi: 10.1162/jocn_a_01611

2019

  1. Aryafar H, Carrillo A, Berquist R, Frank LR, Forsgren K, Dickson KA. Description of a male urogenital papilla in the California grunion, Leuresthes tenuis, a beach-spawning marine silverside fish. Bull South Calif Acad Sci, 118(2): 102-108, 2019.
  2. Galinsky VL, Frank LR. Symplectomorphic registration with phase space regularization by entropy spectrum pathways. Magn Reson Med, 81(2): 1335-1352, 2019.

2018

Neural Computation

  1. Berry DB, Regner B, Galinsky V, Ward SR, Frank LR. Relationships between tissue microstructure and the diffusion tensor in simulated skeletal muscle. Magn Reson Med 80(1): 317-328, 2018.
  2. Frank LR, Galinsky VL, Orf L, Wurman J. Dynamic multiscale modes of severe storm structure detected in mobile Doppler radar data by entropy field decomposition. J Atmos Sci 75(3): 709-730, 2018.
  3. Galinsky VL, Frank LR. Symplectomorphic registration with phase space regularization by entropy spectrum pathways. Magn Reson Med (accepted), 2018.
  4. Galinsky VL, Paulus M, Martinez A, Frank LR. Joint estimation of effective brain wave activation modes using EEG/MEG sensor arrays and multimodal MRI volumes. Neural Comput 30(7): 1725-1749, 2018.
  5. Lewalle A, Land S, Carruth E, Frank LR, Row AT, Aronsen JM, Lamata P, Sjaastad I, Louch WE, Omens JH, McCulloch AD, Nieder SA, Smith NP. Decreasing compensatory ability of concentric ventricular hypertrophy in aortic-banded rat hearts. Front Physiol 9: article 37, 2018.

2017

  1. Berry DB, You S, Frank, LR, Chen S, Ward, S. 3D tissue-printing approach for validation of diffusion tensor imaging in skeletal muscle. Tissue Eng Part A 23(17-18): 980-988, 2017.
  2. Galinsky VL, Frank LR. A unified theory of neuro-MRI data shows scale–free nature of connectivity modes. Neural Comput 29(6): 1441-1467, 2017. doi: 10.1162/NECO_a_00955

2016

Journal of Physics A

  1. Frank LR, Galinsky VL. Detecting spatio-temporal modes in multivariate data by entropy field decomposition. J Phys A 49: 395001, 2016.
  2. Frank LR, Galinsky VL. Dynamic multiscale modes of resting state brain activity detected by entropy field decomposition. Neural Comput, 28(9): 1769-1811, 2016.
  3. Galinsky VL, Frank LR. The lamellar structure of the brain fiber pathways. Neural Comput, 28: 2533-2556, 2016.
  4. Sorg SF, Schiehser DM, Bondi MW, Luc N, Clark AL, Jacobson MW, Frank LR, Delano-Wood L. White matter microstructural compromise is associated with cognition but not posttraumatic stress disorder symptoms in military veterans with traumatic brain injury. J Head Trauma Rehabil, 31: 297-308, 2016.
  5. Yopak KE, Berquist RM, Galinsky VL, Frank LR. Quantitative classification of cerebellar foliation in cartilaginous fishes (Class: Chondrichthyes) using 3D shape analysis and its implications for evolutionary biology. Brain Behav Evol, 87(4): 252-264, 2016.

2015

  1. Berquist RM, Galinsky VL, Kajiura SM, Frank LR. The coelacanth rostral organ is a low-resolution electro-detector that facilitates the strike. Sci Reps 5: 8962, 2015.
  2. Galinsky VL, Frank LR. Simultaneous multi-scale diffusion estimation and tractography guided by entropy spectrum pathways. IEEE Trans Med Imaging, 34: 1177-1193, 2015.

2014

  1. Frank LR, Galinsky VL. Information pathways in a disordered lattice. Phys. Rev. E. 89: 032142, 2014.
  2. Galinsky VL, Frank LR. Automated segmentation and shape characterization of volumetric data. Neuroimage 92: 156-168, 2014.
  3. Graham JB, Wegner NC, Miller LA, Jew CJ, Lai NC, Berquist RM, Frank LR, Long JA. Spiracular air breathing in polypterid fishes and its implications for aerial respiration in stem tetrapods. Nat Commun 5: e3022, 2014.
  4. Sorg SF, Delano-Wood L, Luc N, Schiehser DM, Hanson KL, Nation, DA, Lanni E, Jak AJ, Lu K, Meloy MJ, Frank LR, Lohr JB, Bondi MW. White matter integrity in veterans with mild traumatic brain injury: Associations with executive function and loss of consciousness. J Head Trauma Rehabil 29: 21-32, 2014.

2013

  1. Baxter GT, Frank LR. A computational model for diffusion weighted imaging of myelinated white matter. Neuroimage 75C: 212-220, 2013.
  2. Jacobus J, Thayer RE, Trim RS, Bava S, Frank LR, Tapert SF. White matter integrity, substance use, and risk taking in adolescence. Psychol Addict Behav 27: 431-442, 2013.
  3. Rodriguez-Soto AE, Jaworski R, Jensen A, Niederberger B, Hargens A, Frank LR, Kelly KR, Ward SR. Effect of load carriage on lumbar spine kinematics. Spine 38: 789-791, 2013.
  4. Tangney JR, Chuang JS, Janssen MS, Krishnamurthy A, Liao P, Hoshijima M, Wu X, Meininger GA, Muthuchamy M, Zemljic-Harpf A, Ross R, Frank LR, McCulloch AD, Omens JH. Novel role for vinculin in ventricular myocyte mechanics and dysfunction. Biophys J 104: 1623-1633, 2013.

2012

  1. Berquist RM, Gledhill KM, Peterson MW, Doan AH, Baxter GT, Yopak KE, Kang N, Walker NJ, Hastings PA, Frank LR. The Digital Fish Library: Using MRI to digitize, database, and document the morphological diversity of fish. PLOS ONE 7: e34499, 2012.
  2. Delano-Wood L, Stricker NH, Sorg SF, Nation DA, Jak AJ, Woods SP, Libon DJ, Delis DC, Frank LR, Bondi MW. Posterior cingulum white matter disruption and its associations with verbal memory and stroke risk in mild cognitive impairment. J. Alzheimers Dis 29: 589-603, 2012.
  3. Krishnamurthy A, Villongco C, Chuang J, Frank LR, Nigam V, Belezzuoli N, Stark P, Krummen D, Narayan S, Omens J, McCulloch A, Kerckhoffs, R. Patient-specific models of cardiac biomechanics. J Comput Phys 244: 4-21, 2012.
  4. Krysl P, Bondi MW, Ward S, Frank LR. On sources of error in finite element simulation of blast effects in the human brain. J Comput Nonlinear Dynam 7: 031008, 2012.
  5. Lieber R, Ward S, Frank L, Schenk S. New opportunities and novel paradigms to support neuromuscular research. Phys Med Rehabil Clin N Am 23: 95-105, 2012.
  6. Schweinsburg BC, Scott JC, Schweinsburg AD, Jacobus J, Theilmann RJ, Frank LR, Weber E, Grant I, Woods SP, HIV Neurobehavioral Research Center (HNRC) Group. Altered prefronto-striato-parietal network response to mental rotation in HIV. J Neurovirol 18: 74-79, 2012.
  7. Sorg SF, Taylor MJ, Alhassoon OM, Gongvatana A, Theilmann RJ, Frank LR, Grant I. Frontal white matter integrity predictors of adult alcohol treatment outcome. Biol. Psychiatry 71: 262-8, 2012.
  8. Zhang Y, Liang X, Ma J, Jing Y, Gonzales MJ, Villongco C, Krishnamurthy A, Frank LR, Nigam V, Stark P, Narayan SM, McCullouch AD. An atlas-based geometry pipeline for cardiac Hermite model construction and diffusion tensor reorientation. Med Image Anal 16: 1130-1141, 2012.

2011

  1. Chakrabarty P, Davis MP, Smith WL, Berquist R, Gledhill KM, Frank LR, Sparks JS. Evolution of the light organ system in ponyfishes (Teleostei: Leiognathidae). J Morphol 272: 704-21, 2011.
  2. Rowe T, Frank LR. The disappearing third dimension. Science 331: 712-4, 2011.

2010

  1. Bava S, Theilmann RJ, Sach M, May SJ, Frank LR, Hesselink JR, Vu D, Trauner DA. Developmental changes in cerebral white matter microstructure in a disorder of lysosomal storage. Cortex 46: 206-216, 2010.
  2. Chuang JS, Zemljic-Harpf A, Ross RS, Frank LR, McCulloch AD, Omens JH. Determination of three-dimensional ventricular strain distributions in gene-targeted mice using tagged MRI. Magn Reson Med 64: 1281-8, 2010.
  3. Delano-Wood L, Bondi MW, Jak AJ, Horne NR, Schweinsburg BC, Frank LR, Wierenga CE, Delis DC, Theilmann RJ, Salmon DP. Stroke risk modifies regional white matter differences in mild cognitive impairment. Neurobiol Aging 31:1721-31, 2010.
  4. Frank LR, Jung Y, Inati S, Tyszka JM, Wong EC. High efficiency, low distortion, 3D diffusion tensor imaging with variable density spiral fast spin echoes (3D DW VDS RARE). Neuroimage 49: 1510-23, 2010.

2009

Journal of Morphology

  1. Balls GT, Frank LR. A simulation environment for diffusion weighted MR experiments in complex media. Magn Reson Med 62: 771-8, 2009.
  2. Bava S, Frank LR, McQueeny T, Schweinsburg BC, Schweinsburg AD, Tapert SF. Altered white matter microstructure in adolescent substance users. Psychiatry Res 173: 228-37, 2009.
  3. Fryer SL, Schweinsburg BC, Bjorkquist OA, Frank LR, Mattson SN, Spadoni AD, Riley EP. Characterization of white matter microstructure in fetal alcohol spectrum disorders. Alcohol Clin Exp Res 33: 514-21, 2009.
  4. Gongvatana MA, Schweinsburg BC, Taylor MJ, Theilmann RJ, Letendre SL, Alhassoon OM, Jacobus J, Woods SP, Jernigan TL, Ellis RJ, Frank LR, Grant I. White matter tract injury and cognitive impairment in HIV-infected individuals. J Neurovirol 15: 187-95, 2009.
  5. Jacobus J, McQueeny T, Bava S, Schweinsburg BC, Frank LR, Yang TT, Tapert SF. White matter integrity in adolescents with histories of binge drinking and marijuana use. Neurotoxicology Teratol 31: 349-55, 2009.
  6. McQueeny T, Schweinsburg BC, Schweinsburg AD, Jacobus J, Bava S, Frank LR, Tapert SF. Altered white matter integrity in adolescent binge drinkers. Alcohol Clin Exp Res 33: 1278-85, 2009.
  7. Runcie RM, Dewar H, Hawn DR, Frank LR, Dickson KA. Evidence for cranial endothermy in the opah (Lampris guttatus). J Exp Biol 212: 461-70, 2009.
  8. Stricker NH, Schweinsburg BC, Delano-Wood L, Wierenga CE, Bangen KJ, Haaland KY, Frank LR, Salmon DP, Bondi MW. Decreased white matter integrity in late-myelinating fiber pathways in Alzheimer's disease supports retrogenesis. Neuroimage 45: 10-16, 2009.
  9. Tyszka JM, Frank LR. High-field diffusion MR histology: Image-based correction of eddy current ghosts in diffusion-weighted rapid acquisition with relaxation enhancement (DW-RARE). Magn Reson Med 61: 728-33, 2009.
  10. Yopak KE, Frank LR. Brain size and brain organization of the whale shark, Rhincodon typus, using magnetic resonance imaging. Brain Behav Evol 74: 21-142, 2009.

2008

  1. Buracas G, Wong EC, Liu T, Buxton R, Frank LR. Imaging periodic currents using alternating balanced steady state free precession. Magn Reson Med 59(1): 140-8, 2008.
  2. Frank LR, Lu K, Wong E. Perfusion tensor imaging. Magn Reson Med 60: 1284-1291, 2008.
  3. Fryer SL, Frank LR, Spadoni AD, Theilmann RJ, Nagel BJ, Schweinsburg AD, Tapert SF. Microstructural integrity of the corpus callosum linked with neuropsychological performance in adolescents. Brain Cogn 67(2):225-33, 2008.
  4. Rogers B, Lowe CG, Fernandez-Juricic E, and Frank LR. Ultilizing magnetic resonance imagine (MRI) to assess the effects of angling-induced barotraumas on rockfish (Sebastes). Can J Fish Aquat Sci 65: 1245-1249, 2008.
  5. Tapert S, Fryer SL, Frank LR, Spadoni AD, Theilmann RJ, Nagel BJ, Schweinsburg AD. Microstructural integrity of the corpus callosum linked with neuropsychological performance in adolescents. Brain Cogn 67(2): 225-33, 2008.
  6. Schulteis G, Archer C, Tapert SF, & Frank LR. Intermittent binge alcohol exposure during the periadolescent period induces  spatial working memory deficits in young adult rats.  Alcohol 42(6): 459-67, 2008.

2007

  1. Costandi PN, McCulloch AD, Omens JH, Frank LR. High resolution longitudinal MRI of the transition to heart failure. Magn Reson Med 57: 714-720, 2007.
  2. Perry CN, Cartamil DC, Bernal D, Sepulveda CA, Theilmann RJ, Graham JB, Frank LR. Quantification of red myotomal muscle volume and geometry in the shortfin mako shark (Isurus oxyrinchus) and the salmon shark (Lamna ditropis), using T1-weighted magnetic resonance imaging. J Morphol 268: 284-92, 2007.
  3. Sepulveda CA, Dickson KA, Frank LR, Graham JB. Cranial endothermy and a putative brain heater in the most basal tuna species, Allothunnus fallai. J Fish Biol 70: 1720-1733, 2007.
  4. Tapert SF, Schweinsburg AD, Drummond SP, Paulus MP, Brown SA, Yang TT, Frank LR. Functional MRI of inhibitory processing in abstinent adolescent marijuana users. Psychopharmacology 194: 173-83, 2007.
  5. Yopak, K.E. and Frank, L.R. Variation in cerebellar fFoliation in cartilaginous fishes: Ecological and behavioral considerations. Brain, Behavior, and Evolution 70: 210, 2007

2006

  1. Bolar DS, Levin DL, Hopkins SR, Frank LR, Liu TT, Wong EC, Buxton RB. Quantification of regional pulmonary blood flow using ASL-FAIRER. Magn Reson Med 55: 1308-1317, 2006.
  2. Clark CP, Brown GG, Frank LR, Thomas L, Sutherland AN, Gillin CJ. Improved anatomic delineation of the antidepressant response to partial sleep deprivation in medial frontal cortex using perfusion-weighted functional MRI. Psychiatry Res 146: 213-222, 2006.
  3. Costandi PN, Frank LR, McCulloch AD, Omens JH. Role of diastolic properties in the transition to failure in a mouse model of the cardiac dilatation. Am J Physiol Heart Circ Physiol 291: H2971-9, 2006.
  4. Paulus MP, Frank LR. Anterior cingulate activity modulates nonlinear decision weight function of uncertain prospects. Neuroimage 30: 668-677, 2006.
  5. Wong EC, Cronin M, Wu WC, Inglis B, Frank LR, Liu TT. Velocity-selective arterial spin labeling. Magn Reson Med 55: 1334-1341, 2006.

2004

  1. Brown GG, Caligiuri M, Meloy MJ, Eberson SC, Kindermann SS, Frank LR, Eyler Zorrilla LT, Lohr JB. Functional brain asymmetries during visuomotor tracking. J Clin Exp Neuropsychol 26: 356-8, 2004.
  2. Caliguiri MP, Brown GG, Meloy MJ, Eyler LT, Kinderman SS, Eberson S, Frank LR, Lohr JB. A functional magnetic resonance imaging study of cortical asymmetry in bipolar disorder. Bipolar Disord 6: 183-196, 2004.
  3. Liu TT, Frank LR. Efficiency, power, and entropy in event-related fMRI with multiple trial types. Part I: Theory. Neuroimage 21: 387-400, 2004.
  4. Obata T, Liu TT, Miller KL, Luh WM, Wong EC, Frank LR, Buxton RB. Discrepancies between BOLD and flow dynamics in primary and supplementary motor areas: Application of the balloon model to the interpretation of BOLD transients. Neuroimage 21: 144-153, 2004.
  5. Tapert SF, Schweinsburg AD, Barlett VC, Meloy MJ, Brown SA, Brown GG, Frank LR. BOLD response and spatial working memory in alcohol use disordered adolescents. Alcohol Clin Exp Res 28: 1577-86, 2004.

Video & Film

  1. National Geographic Ultimate Shark Video Footage, University of California at San Diego, Interview regarding MR imaging and Digital Fish Library research and progress, Discovery Channel Canada, 2006.
  2. Video Footage, Jayton, TX, "Tornado Intercept", National Geographic Television and Film.
  3. Video Footage, San Diego CA, “National Geographic Explorer – Ultimate Sharks”, National Geographic Television and Film, 2007.
  4. Video Footage, San Diego, CA, “National Geographic Explorer – Shark Superhighway: Hammerheads”, National Geographic Television and Film, 2008.
  5. Video Footage, San Diego CA, “National Geographic Wild – Shocking Sharks”, National Geographic Television and Film, 2012.

Web Publications

  1. Yopak, K.E. 2008. Pacific Shark Research Center , Moss Landing Marine Laboratories, Featured Elasmobranch of the Month: The Copper Shark, Carcharhinus brachyurus. Published for the web, http://psrc.mlml.calstate.edu/elamon_feb08.htm. February 1, 2008.

Conference Abstracts

    2020

  1. Berry DB, Englund EK, Galinsky V, Frank LR, Ward SR. Using the random permeable barrier model to predict fiber size in histology informed simulated skeletal muscle models. International Society for Magnetic Resonance in Medicine (ISMRM 2020), Virtual. (August 8-14, 2020).
  2. Englund EK, Berry DB, Galinsky V, Frank LR, Ward SR. Comparison of simulated and experimental time-dependent diffusion in skeletal muscle. International Society for Magnetic Resonance in Medicine (ISMRM 2020), Virtual. (August 8-14, 2020).
  3. Frank LR, Galinsky VL, Orf L, Bodine D. Detection and estimation of multi-scale complex spatiotemporal processes in tornadic supercells from multiparameter radar simulations and observations. American Meteorological Society’s Severe Local Storms Symposium, 100th Meeting of the American Meteorological Society (AMS). Boston, MA. (January 12-16, 2020)
  4. Solders SK, Clark AL, Weigand AJ, Sorg SF, Galinsky VL, Frank LR, Bondi MW. The locus coeruleus: In-vivo characterization with advanced MRI methods and associations with memory in older adults at risk for Alzheimer’s disease. Alzheimer's Association International Conference (AAIC 2019), Virtual. (July 26-30, 2020).

    5. 2019

  5. Berry DB, Englund E, Galinsky V, Konersman C, Chen S, Ward SR, Frank LR. Simulated effect of diffusion time and skeletal muscle fiber size on the diffusion tensor. 25th Annual Meeting of the International Society for Magnetic Resonance in Medicine (ISMRM). Montreal, Quebec, Canada. (May 11-16, 2019).
  6. Berry DB, Englund EE, Ward SR, Frank LR. Varying diffusion time to discriminate between simulated skeletal muscle injury models using stimulated echo DTI. MRI & MRS in Neuromuscular Disease (Myo-MRI) 2019, Berlin, Germany. (November 17-19, 2019).
  7. Berry DB, Englund EE, Shahidi B, Frank LR, Ward SR. Mulitparametric MRI characterization of level dependent differences in lumbae muscle size, quality, and microstructure. MRI & MRS in Neuromuscular Disease (Myo-MRI) 2019, Berlin, Germany. (November 17-19, 2019).
  8. Englund E, Berry DB, Frank LR, Ward SR, Shahidi B. Changes in lumbar extensor muscle blood flow following exercise assessed with intravoxel incoherent motion. MRI & MRS in Neuromuscular Disease (Myo-MRI) 2019, Berlin, Germany. (November 17-19, 2019).
  9. Galinsky VL, Frank LR. "A physical model of localized persistent weakly-evanescent cortical brain waves". 25th Annual Meeting of the Organization for Human Brain Mapping (OHBM). Rome, Italy. (June 9-13, 2019).
  10. Solders SK, Clark AL, Weigand AJ, Sorg SF, Galinsky VL, Frank LR, Bondi MW. The locus coeruleus: In-vivo characterization with advanced MRI methods and associations with memory in older adults at risk for Alzheimer’s disease. 2019 Alzheimer's Association International Conference (AAIC 2019), Los Angeles, CA. (July 14-18, 2019)
  11. Weigand AJ, Mikhael T, Simone SM, Solders SK, Thayer RE, Cummins PN, Frank LR, Granholm EE, Bondi MW. Reduced locus coeruleus integrity is associated with poor attentional control in older adults without dementia. Alzheimer's Association International Conference (AAIC 2019), Los Angeles, CA. (July 14-18, 2019).

    12. 2018

  12. Cummins PN, Weigand AJ, Thayer RE, Simone SM, Mikhael T, Solders S, Frank LR, Granholm EL, Bondi MW. "Locus Coeruleus integrity is associated with age and memory performance in older adults." Western Psychological Association (WPA) 98th Annual Convention, Portland, OR (April 26-29, 2018).
  13. Galinsky VL, Paulus M, Martinez A, Frank LR. "Brain wave activation modes with CORT-JESTER." 24th Annual Meeting of the Organization for Human Brain Mapping (OHBM). Singapore, Singapore, 2018).
  14. Weigand AJ, Delano-Wood L, Bangen KJ, Edmonds EC, Eppid JS, Werhane M, Igwe KC, Granholm EL, Frank LR, Brickman AM, Bondi MW. "Reduced locus coeruleus integrity is associated with elevated white matter lesion pathology in older adults without dementia." Alzheimer's Association International Conference (AAIC), Chicago, IL. (June 22-26, 2018).

    15. 2017

  15. Berry DB, You S, Warner J, Frank LR, Chen S, Ward S. "A 3D printed approach to fabricate microscale phantoms for diffusion tensor imaging." 25th Annual Meeting of the International Society for Magnetic Resonance Imaging (ISMRM). Honolulu, HI, 2017.
  16. Frank L, Clyne J, Lesperance T, Norton A, Pearse S."WASP: Intelligent storage for gridded numerical data." NSF SI2 PI Meeting, Arlington, VA, 2017.
  17. Galinsky VL, Frank LR. "Effective connectivitu eigenmodes produced by unified theory of neuro-MRI data." 23rd Organization for Human Brain Mapping (OHBM) Annual Meeting. Vancouver, BC, Canada, 2017.
  18. Kajiura SM, Berquist RM, Meridith T, Frank LR. "Diffusion tensor magnetic resonance microscopy reveals novel olfactory system neural organization in the Atlantic stingray, Dasyatis sabina." Joint Meeting of the American Society of Ichthyologists & Herpetologists (ASIH) and the American Elasmobranch Society (AES). New Orleans, LA, 2017).
  19. Winchester JM, Boyer DM, Frank LR, Maga M. "Integrating MorphoSource, a comunity digital repository for 3D speciment data with morphometric analysis pipelines." Annual Meeting of the Geological Society of American (GSA 2017). Seattle, WA, 2017.

    20. 2016

  20. Aryafar H, Carillo A, Berquist R, Frank L, Valasco B, Forsgren K, Dickson K. "Description of the male genital papilla in the California grunion, a silverside fish that spawns on sandy beaches." Annual Meeting of the Society for Integrative and Comparative Biology (SICB), Portland, OR, 2016.
  21. Berry D, Regner B, Galinsky V, Frank LR, Ward S. "The relationship between microstructure and the diffusion tensor in simulated skeletal muscle." 24th International Society for Magnetic Resonance in Medicine (ISMRM) Annual Meeting, Singapore, Singapore, 2016.
  22. Carruth E, Frank L, McCulloch, Omens J. "Regional gradients in tissue anisotropy during pressure overload hypertrophy reflect endogenous heterogeneity in the rat ventricles." Experimental Biology Annual Meeting, San Diego, CA, 2016.
  23. Clyne J, Frank L, Lesperance T, Norton A, Pearse S."WASP: Intelligent storage for gridded numerical data." 5th Annual Extreme Science and Engineering Discovery Environment Conference (XSEDE16), Miami, FL, 2016.
  24. Frank LR, Galinsky VL. "Dynamic multi-scale modes of resting state brain activity detected by entropy field decomposition." Organization for Human Brain Mapping (OHBM) Annual Meeting, Geneva, Switzerland, 2016.
  25. Frank LR, Galinsky VL, Orf L, Wurman J. "Dynamic multi-scale modes of severe storm structure detected in mobile Doppler radar data by entropy field decomposition. American Meterological Society's (AMS) 28th Conference on Local Severe Storms, Portland, OR, 2016.
  26. Galinsky VL, Frank LR. "SymReg-ESP - An efficient and accurate method for human brain inter-modality registration." Organization for Human Brain Mapping (OHBM) Annual Meeting, Geneva, Switzerland, 2016.
  27. Kajiura SM, Berquist RM, Meredith T, Frank LR. "Diffusion tensor magnetic resonance microscopy reveals novel olfactory system neural organization in the Atlantic stingray, Dasyatis sabina." Joint Meeting of the American Society of Ichthyologists & Herpetologists (AISH) and the American Elasmobanch Society (AES), New Orleans, LA, 2016.
  28. Kleinnijenhuis M, Mollink J, Johnson E, Galinsky V, Frank L, Jbabdi S, Miller KL. "The effect of axon shape amd myelination on diffusion signals in a realistic Monte Carlo simulation environment." 24th International Society for Magnetic Resonance in Medicine (ISMRM) Annual Meeting, Singapore, Singapore, 2016.
  29. Kleinnijenhuis M, Mollink J, Johnson E, Galinsky V, Frank L, Jbabdi S, Miller KL. "The effect of axon shape amd myelination on diffusion signals in a realistic Monte Carlo simulation environment."Organization for Human Brain Mapping (OHBM) Annual Meeting, Geneva, Switzerland, 2016.

    30. 2015

  30. Kleinnijenhuis M, Mollink J, Kinchesh P, Lam W, Khrapitchev A, Sibson N, Galinsky V, Frank L, Smart S, Jbabdi S, Miller K. "Monte Carlo simulations disambiguate the biophysical mechanisms of diffusion hindrance along tracts." Organization for Human Brain Mapping (OHBM) Annual Meeting, Honolulu, Hawaii, 2015.
  31. Kleinnijenhuis M, Mollink J, Kinchesh P, Lam WW, Galinsky VL, Frank LR, Smart SC, Jbabdi S, Miller KL. "Monte Carlo diffusion simulations disambiguate the biophysical mechanisms of diffusion hinderance along tracts." 23rd International Society for Magnetic Resonance in Medicine (ISMRM) Annual Meeting, Toronto, Canada, 2015.

    32. 2014

  32. Baxter GT, Galinsky V, Ozarslan E, Basser PJ, Frank LR. "The effect of diffusion in the extracellular space on double-PFG measurements of axon size: Insights from Monte-Carlo simulations." 22nd Annual Meeting of the International Society Magnetic Resonance in Medicine. Milan, Italy, 2014.

    33. 2013

  33. Baxter GT, Frank LR. "Monte Carlo simulation of white matter as a composite porous medium." 21st Annual Meeting of the International Society Magnetic Resonance in Medicine. Salt Lake City, UT, 2013.

    34. 2012

  34. Frank, LR, Meyer, D. "Maximal entropy tractography." 20th Annual Meeting of the International Society Magnetic Resonance in Medicine. Melbourne, Australia, 2012.
  35. Rodriguez-Soto AE, Jensen A, Jaworski R, Kelly K, Frank L, Ward SR. "Lumbar spine kinematics in marine corps soldiers carrying heavy loads." 59th Annual Meeting of the American College of Sports Medicine (ACSM). San Francisco, CA, 2012.
  36. Rodriguez-Soto AE, Jensen A, Mayfield J, Jaworski R, Frank LR, Ward SR, Kelly K. "Load-carrying lumbar spine kinematics in active-duty marines." Annual Meeting of the Federation of American Societies for Experimental Biology. San Diego, CA, 2012.
  37. Villongco CT, Frank LR, Krummen DE, Nigam V, Kerckhoffs RCP, Omens JH, McCulloch AD. "Incorporating human ventricular fiber architecture in patient-specific computational models". Annual Meeting of the Federation of American Societies for Experimental Biology.  San Diego, CA, 2012.

    38. 2011

  38. Baxter GT, Ozarslan E, Basser PJ, Frank LR. "Simulation of double pulsed field gradient experiments." 19th Scientific Meeting of the International Society for Magnetic Resonance in Medicine. Montreal, Canada, 2011.
  39. Jacobus J, Thayer RE, Trim R, Bava S, Frank LR, Tapert SF. "Longitudinal diffusion tensor imaging data in adolescent binge drinkers using versus not using marijuana." 35th Annual Research Society on Alcoholism Scientific Meeting. Atlanta, GA, 2011.
  40. Aryafar H, Frank LR, Berquist RM, Dickson KA. "Possible sexual dimorphism in the California grunion, Leuresthes tenuis (Athiniformes: Atherinopsidae)." Annual Meeting of the American Society of Ichthyologists and Herpetologists. Minneapolis, MN, 2011.

    41. 2010

  41. Yopak KE, Frank LR. "New approaches to the study of comparative neuroanatomy in marine vertebrates using MRI: The whale shark, Rhincodon typus, as a case study." 18th Annual Meeting of the International Society Magnetic Resonance in Medicine. Stockholm, Sweden, 2010.
  42. Yopak KE, Ainsley S, Ebert DA, Frank LR. "Exploring adaptive evolution in the brains of bathyal skates (Family: Rajidae): Phylogenetic and ecological perspectives." The J.B. Johnston Club and the 21st Annual Karger Workshop. San Diego, CA, 2010.
  43. Yopak KE, Ainsley S, Ebert DA, Frank LR. "Skating over the issue: Neural adaptations to the bathyal environment in deep-sea skates." Joint Annual Meeting of the American Elasmobranch Society and the American Society of Ichthyologists and Herpetologists. Providence, RI, 2010.

    44. 2009

  44. Kang N, Balls G, Frank LR. "Diffusion simulation tractography for high angular resolution diffusion imaging." 17th Scientific Meeting of the International Society for Magnetic Resonance in Medicine. Honolulu, HI, 2009
  45. Frank LR, Tyszka JM. "Estimation of local tissue diffusion anisotropy with hyperecho coherence pathway selective (HyperCOPS) diffusion tensor imaging." 17th Scientific Meeting of the International Society for Magnetic Resonance in Medicine. Honolulu, HI, 2009.
  46. Sorg SF, Luc N, Lanni E, Bondi MW, Jak AJ, Dev S, Chang YL, Schiehser D, Delis DC, Frank LR, Delano-Wood L. "Anterior cingulate white matter integrity predicts hyperarousal in blast force TBI: Diffusion tensor imaging study." 117th Annual Convention of the American Psychological Association, Division 40. Toronto, Canada, 2009.
  47. Yopak KE, Frank LR. "Defying evolutionary expectations: Analysis of the brain of the whale shark, Rhincodon typus, using magnetic resonance imaging." Joint Meeting of the American Elasmobranch Society and the American Society of Ichthyologists and Herpetologists. Invited Symposium Presentation. Portland, OR, 2009
  48. Yopak KE, Balls G, Frank LR. "Cortical surface structure analysis in sharks using magnetic resonance imaging (MRI)." ISMRM Annual Meeting. Honolulu, Hawaii, 2009.

    49. 2008

  49. Tapert SF, Schweinsburg AD, Drummond S, Paulus MP, Brown SA, Yang TT, Frank LR. "Functional MRI of inhibitory processing in abstinent adolescent marijuana users." 36th Annual International Neuropsychological Society. Waikoloa, HI, 2008.
  50. Lu K, Wong EC, Frank LR. "Perfusion tensor imaging of human skeletal muscle." 16th Scientific Meeting of the International Society for Magnetic Resonance in Medicine. Toronto, Canada, 2008.
  51. Tyszka JM, Frank LR. "Rapid high-field diffusion MR histology: Image-based phase correction for diffusion-weighted RARE." 16th Scientific Meeting of the International Society for Magnetic Resonance in Medicine. Toronto, Canada, 2008.
  52. Balls G, Frank LR. "A realistic DTI simulation environment."  16th Scientific Meeting of the International Society for Magnetic Resonance in Medicine. Toronto, Canada, 2008.
  53. Yopak KE, Frank LR. "A neural basis for a shark's motor repertoire? Quantifying the complexity of the cerebellum using magnetic resonance imaging (MRI)." Joint Meeting of the American Elasmobranch Society and the American Society of Ichthyologists and Herpetologists. Montréal, Canada, 2008.
  54. Chuang JSA, Omens J, McCulloch A, Sheikh F, Frank LR. "Rapid, noninvasive phenotyping of the mouse right ventricle using MRI." Annual Meeting of the Federation of American Societies for Experimental Biology. San Diego, CA, 2008.
  55. McQueeny T, Schweinsburg BC, Schweinsburg AD, Jacobus J, Frank LR, Tapert SF. "Altered white matter integrity in adolescent binge drinkers." International Conference on Applications of Neuroimaging to Alcoholism. New Haven, CT, 2008.
  56. Balls G, Frank LR. "A simulation environment for high angular resolution DTI." 11th International Conference on Medical Image Computing and Computer Assisted Intervention. New York, NY, 2008.
  57. Bava S, Frank LR, McQueeny T, Schweinsburg AD, Tapert SF. "White matter integrity in adolescent marijuana users."  Annual Meeting of the International Neuropsychological Society. Honolulu, HI, 2008.
  58. Yopak KE, Frank LR. "A neural basis for a shark's motor repertoire? Quantifying the complexity of the cerebellum using magnetic resonance imaging (MRI)." Joint Meeting of the American Elasmobranch Society and the American Society of Ichthyologists and Herpetologists. Montréal, Canada, 2008.

    59. 2007

  59. Frank LR, Balls G. "Diffusion tensor imaging (DTI) in realistic neural tissues." 2007 SIAM Conference on Computational Science and Engineering Simulation. Costa Mesa, CA, 2007.
  60. Theilmann RJ, Scadeng M, Frank LR. "High resolution radial diffusion-weighted imaging at 7T." 15th Annual Meeting of the International Society Magnetic Resonance in Medicine and the European Society for Magnetic Resonance in Medicine Biology. Berlin, Germany, 2007.
  61. Chuang J, McCulloch A, Omens J, Frank LR. "Generation of an accurate 3D computational model of the mouse heart from MR images." 15th Annual Meeting of the International Society Magnetic Resonance in Medicine and the European Society for Magnetic Resonance in Medicine Biology. Berlin, Germany, 2007.
  62. May L, Frank LR. "An 8-channel geometry optimized RF coil array for imaging of fish at 3T." 15th Annual Meeting of the International Society Magnetic Resonance in Medicine and the European Society for Magnetic Resonance in Medicine Biology. Berlin, Germany, 2007.
  63. Rogers BL, Fernandez-Juricic E, Lowe CG, Frank LR. "Assessing the effects of angling-induced barotraumas on green-blotched rockfish (Sebastes rosenblatti) using T2-weighted magnetic resonance imaging." Annual Meeting of the Western Society of Naturalists. Ventura, CA, 2007.
  64. Scadeng M, Theilmann R, Frank LR. "Preparation of biological specimens for MR archiving." 15th Annual Meeting of the International Society Magnetic Resonance in Medicine and the European Society for Magnetic Resonance in Medicine Biology. Berlin, Germany, 2007.
  65. Yopak KE, Frank LR. "Variation in cerebellar foliation in cartilaginous fishes: Ecological and behavioral considerations." Annual Meeting of the J.B. Johnston Club and the 19th Annual Karger Workshop. San Diego, CA, USA, 2007.
  66. Yopak K, Lisney T, Collin S, Montgomery J, and Frank L. "The batoid brain: Correlations with ecology, locomotory mode, and fin morphology." Joint Meeting of the American Elasmobranch Society and the American Society of Ichthyologists and Herpetologists. July 11-16. St. Louis, MO, USA, 2007.
  67. Frank LR, Balls G. "Diffusion tensor imaging (DTI) in realistic neural tissues." 2007 SIAM Conference on Computational Science and Engineering Simulation. Costa Mesa, CA, 2007.

    68. 2006

  68. Frank LR, Balls G, Rapp JL. "Simulation of the MRI measurement of diffusion in realistic neural tissue models." 28th Annual International Conference of the IEEE Engineering in Medicine and Biology Society. New York, NY, 2006.
  69. Spadoni AD, Fryer SL, Frank LR, Tapert SF. "Adolescent neuropsychological performance predicts callosal microstructure." International Neuropsychological Society Annual Convention. Boston, MA, 2006.
  70. Delano-Wood L, Schweinsbuerg AD, Wierenga CE, Jak AJ, Salmon DP, Thal LJ, Frank LR, Bondi MW. "White matter integrity in nondemented older adults at-risk for Alzheimer’s Disease:  A diffusion tensor imaging study." 34th Annual Meeting of the International Neuropsychological Society. Boston, MA, 2006.
  71. Costandi PN, McCulloch AD, Frank LR, Omens JH. "Hypertrophic remodeling in a murine heart failure model." Annual Meeting of the Federation of American Societies for Experimental Biology. San Francisco, CA, 2006.
  72. Zawada DG, Rohwer FL, Frank LR. "Scalability of coral rugosity from microns to centimeters." Fall Meeting of the American Geophysical Union. San Francisco, CA, 2006.
  73. Eichberger G, Perry CN, Walker HJ, Hastings P, Linsen L, Frank LR. "Interactive 3D graphics for web-based data analysis and visualization for the Digital Fish Library (DFL)." 33rd International Conference and Exhibition on Computer Graphics and Interactive Techniques. Boston, MA, 2006.

    74. 2005

  74. Frank LR, Rapp JL. "Smoothed particle hydrodynamics (SPH) simulation of diffusion in realistic neural tissue models." 13th Annual Meeting of the International Society Magnetic Resonance in Medicine. Miami, FL, 2005.

    75. 2004

  75. Constandi PN, Omens JH, McCulloch AD, Frank LR. "Regenerative myocardial tissue in a murine infarction model." 12th Annual Meeting of the International Society Magnetic Resonance in Medicine. Kyoto, Japan, 2004.
  76. Frank LR, Wong EC. "Perfusion tensor imaging." 12th Annual Meeting of the International Society Magnetic Resonance in Medicine. Kyoto, Japan, 2004.
  77. Frank LR, Wong EC. "Measurement of resting perfusion and perfusion anisotropy in muscle with velocity selective ASL." 12th Annual Meeting of the International Society Magnetic Resonance in Medicine. Kyoto, Japan, 2004.
  78. Theilmann RJ, Frank LR. "Experimental verification of increased diffusion sensitivity with hyperechos." 12th Annual Meeting of the International Society Magnetic Resonance in Medicine. Kyoto, Japan, 2004.
  79. Cronin MV, Wong EC, Wu WC, Frank LR. "Directional dependence in velocity selective arterial spin labeling." 12th Annual Meeting of the International Society Magnetic Resonance in Medicine. Kyoto, Japan, 2004.
  80. Schweinsburg AD, Schweinsburg BC, Frank LR, Theilmann RJ, Brown SA, Tapert SF. "Frontal and parietal white matter microstructure predicts fMRI response in adolescents with alcohol use disorders." Annual Meeting of the Research Society on Alcoholism. Vancouver, Canada, 2004.