AFNI Diffusion Plugin Users Guide

Table of Contents

1. Introduction

2. Installation

2.1. Prerequisites
2.2. Download
2.3. Building AFNI and the Plugin
2.4. Setting AFNI Environment Variables

3. Examining and Analyzing Diffusion Data

3.1. Choosing a Dataset
3.2. Examining Voxel Data
3.3. Calculating the Diffusion Tensor and Anisotropy Metrics

A. edif2afni

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